import pandas as pd
import sys
sys.path.append('../')
from source.bokeh_plots import *
from source.data_visualization import *
output_notebook()
print('\n')
file_path = '../data/al_atlas_main_results.xlsx'
# Read the data
df = pd.read_excel(file_path, index_col=0).sort_index()
test_sample_name = 'uf_hembank_1852'
mount = '/mnt/d/'
input_path = mount + 'MethylScore_v2/Processed_Data/'
df_nanopore = pd.read_excel(input_path + test_sample_name + '_processed.xlsx', index_col=0)
df = pd.concat([df, df_nanopore])
plot_linked_scatters(df, table=False, test_sample=test_sample_name,
xaxis = "PaCMAP 1 of 2", yaxis = "PaCMAP 2 of 2")
